BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E06LP1|AL426697
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 1578 0.0
>3x_Contig1595
Length = 10795
Score = 1578 bits (796), Expect = 0.0
Identities = 798/799 (99%)
Strand = Plus / Minus
Query: 1 gatccagtnctttccagcagtagtagccgttacaactgaacgctttcctcaccccgagga 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 gatccagttctttccagcagtagtagccgttacaactgaacgctttcctcaccccgagga 1793
Query: 61 gatcgttataatgagccatgtaaccttcactcatgaaccattggcccaatttttcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 gatcgttataatgagccatgtaaccttcactcatgaaccattggcccaatttttcttgtt 1733
Query: 121 ggtacaaagaaacaacgctatcaggatactgtttcctaatggattcaatcaattgtttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 ggtacaaagaaacaacgctatcaggatactgtttcctaatggattcaatcaattgtttgc 1673
Query: 181 cggagaagtactcattgggaagctttgagatcgggatgaaccgtttggaatacttgatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 cggagaagtactcattgggaagctttgagatcgggatgaaccgtttggaatacttgatat 1613
Query: 241 cgtctttaagccatctcaaaaatttaaacataacggttcgacttggaaattgcagtattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 cgtctttaagccatctcaaaaatttaaacataacggttcgacttggaaattgcagtattc 1553
Query: 301 ctccagcaacagggcaatgatggtcatctttatccttgtcatataccactgattggtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 ctccagcaacagggcaatgatggtcatctttatccttgtcatataccactgattggtctt 1493
Query: 361 gaatctctaatttcaacgttttccattgtttcaattccttgatcaggcttgcatccctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 gaatctctaatttcaacgttttccattgtttcaattccttgatcaggcttgcatccctcc 1433
Query: 421 ccttattctctttacattgtcctagtaaagattcataccgtttcagcaagtgatctaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 ccttattctctttacattgtcctagtaaagattcataccgtttcagcaagtgatctaaac 1373
Query: 481 ttgtggtatcaaccttgtacgacttcaaactctcagtaatcttctcaaccacttgttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 ttgtggtatcaaccttgtacgacttcaaactctcagtaatcttctcaaccacttgttccc 1313
Query: 541 ccactatagttactttagggtctggtgcctttttcatcgacagcagcgatgcgttccaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 ccactatagttactttagggtctggtgcctttttcatcgacagcagcgatgcgttccaca 1253
Query: 601 cattattcaaatgattcaagaactgtgaaagccgcattatcgattgtatatcttgtgtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 cattattcaaatgattcaagaactgtgaaagccgcattatcgattgtatatcttgtgtaa 1193
Query: 661 tcgcatcgtataacgaattaacactcacggtgcttacggggctccaaaaagtgtacctta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 tcgcatcgtataacgaattaacactcacggtgcttacggggctccaaaaagtgtacctta 1133
Query: 721 aatccattactttggtgtgtgggatgcctaccacttacagagaggaatgttgttcgtgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aatccattactttggtgtgtgggatgcctaccacttacagagaggaatgttgttcgtgtt 1073
Query: 781 tcgtaaatagtatccaatg 799
|||||||||||||||||||
Sbjct: 1072 tcgtaaatagtatccaatg 1054
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5492
Number of Sequences: 1807
Number of extensions: 5492
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)